{
  "version": "1.0",
  "normalized": false,
  "dataset_id": "local_dataset",
  "name": "output-XETG00214__0040736__1386591529__20240828__215041cell_by_gene",
  "type": "h5ad",
  "statistics": {
    "total_cells": 63164,
    "total_genes": 300,
    "spatial_dimensions": 2,
    "available_embeddings": [],
    "cluster_count": 12
  },
  "processing": {
    "spatial_scaling_factor": 1.0,
    "chunk_size": 1,
    "num_chunks": 300,
    "created_by": "process_spatial_data.py"
  },
  "files": {
    "coordinates": [
      "spatial"
    ],
    "expression_chunks": 300,
    "observation_columns": [
      "genomic_control_counts",
      "cell_area",
      "nucleus_area",
      "transcript_counts",
      "deprecated_codeword_counts",
      "nucleus_count",
      "control_codeword_counts",
      "control_probe_counts",
      "basal_ganglia_and_adjacent",
      "unassigned_codeword_counts",
      "segmentation_method",
      "counts_qc_pass",
      "filename",
      "total_counts",
      "cell_id"
    ],
    "de_stats": [
      "genomic_control_counts",
      "transcript_counts",
      "deprecated_codeword_counts",
      "nucleus_count",
      "control_codeword_counts",
      "control_probe_counts",
      "basal_ganglia_and_adjacent",
      "unassigned_codeword_counts",
      "segmentation_method",
      "counts_qc_pass",
      "filename"
    ]
  }
}